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improve / modify input data and the list of variables covered by the final output DF (MR !15)

issue

  • the input data frames were not complete- e.g. some laboratory analyses had to be done, weather data added- and were not read in completely (some columns were ignored until now)

solution

  • input files were cleaned and missing information added
    • These input dataframes are now complete (measCamp_field-data_withoutnotes.csv
    • new data added to read_raw_data input, namely:
      • vegetation max height of shrub, grass, peat, (other) moss
      • vegetation cover of grass, peat, moss, shrub, lichen
      • green canopy cover
      • active layer depth
      • sky condition (overcast, mostly cloudy, partly cloudy, sunny)
      • precipitation (rain, snow, hail)
      • precipitation in mm (total amount of precipitation during that measurement period)
      • wind speed in m/s (usually for half a day)
      • wind gusts in m/s (not used for now, maybe needed later)
      • wind direction
      • air temperature in degrees C
      • weather data '(maybe from ICOS)
    • NOTE: the soil nutrient data will be added post-processing because it is only sporadic and doesn't correspond with the measurement times
    • data is added to the final dataframe in create_meas_period_metadata_df and later combined with the output from the goFlux calculation in combine_all_data_and_meta_data

testing

  • runs for measCamp 202305, 202309, 202406, 202407, 202408
  • 202209, 202306 and 202307 can only be tested once MR !11 is done

follow-up

  • test again after including changes for measCamp 202209, 202306 and 202307 (data will be read in differently for first two)

Closes #12 (closed)

Edited by Jan Engel

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